Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
SCG3Q8WXD2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 MRPL3P1-201ENST00000400109 1033 ntBASIC17.58■□□□□ 0.4
SCG3Q8WXD2 RBM17P3-201ENST00000417687 1192 ntBASIC17.58■□□□□ 0.4
SCG3Q8WXD2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 SCARNA2-201ENST00000458748 420 ntBASIC17.58■□□□□ 0.4
SCG3Q8WXD2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 AC122714.2-201ENST00000502787 707 ntBASIC17.58■□□□□ 0.4
SCG3Q8WXD2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 AP001005.1-201ENST00000571755 1248 ntBASIC17.58■□□□□ 0.4
SCG3Q8WXD2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.58■□□□□ 0.4
SCG3Q8WXD2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.58■□□□□ 0.4
SCG3Q8WXD2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 AC125634.1-201ENST00000438758 1403 ntBASIC17.57■□□□□ 0.4
SCG3Q8WXD2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.57■□□□□ 0.4
SCG3Q8WXD2 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.57■□□□□ 0.4
SCG3Q8WXD2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 AL138831.2-201ENST00000606564 490 ntBASIC17.57■□□□□ 0.4
SCG3Q8WXD2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCG3Q8WXD2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.56■□□□□ 0.4
SCG3Q8WXD2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms