Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD5Q8TDI0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 AL078644.1-201ENST00000609881 752 ntBASIC17.15■□□□□ 0.34
CHD5Q8TDI0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 AC012569.1-201ENST00000591191 1524 ntBASIC17.15■□□□□ 0.34
CHD5Q8TDI0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 BX842568.4-201ENST00000421222 227 ntBASIC17.15■□□□□ 0.34
CHD5Q8TDI0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD5Q8TDI0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHD5Q8TDI0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
CHD5Q8TDI0 AC012313.1-201ENST00000593393 3059 ntBASIC17.14■□□□□ 0.34
CHD5Q8TDI0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.14■□□□□ 0.34
CHD5Q8TDI0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.14■□□□□ 0.34
CHD5Q8TDI0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.14■□□□□ 0.34
CHD5Q8TDI0 AC025580.3-201ENST00000617932 1424 ntBASIC17.14■□□□□ 0.33
CHD5Q8TDI0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 PMS2P4-201ENST00000412466 1052 ntBASIC17.14■□□□□ 0.33
CHD5Q8TDI0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 FAM185BP-201ENST00000443595 716 ntBASIC17.14■□□□□ 0.33
CHD5Q8TDI0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 MTDHP5-201ENST00000598980 586 ntBASIC17.14■□□□□ 0.33
CHD5Q8TDI0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 AC020916.1-201ENST00000587762 1774 ntBASIC17.14■□□□□ 0.33
CHD5Q8TDI0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD5Q8TDI0 GGT4P-201ENST00000623672 1708 ntBASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.13■□□□□ 0.33
CHD5Q8TDI0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AP002490.2-201ENST00000524791 560 ntBASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 BCAR1-209ENST00000546196 1340 ntBASIC17.13■□□□□ 0.33
CHD5Q8TDI0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD5Q8TDI0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms