Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 DUX4L17-201ENST00000557360 1267 ntBASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 MIR7706-201ENST00000613747 67 ntBASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCC2Q8TAQ2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 PRYP5-201ENST00000451909 266 ntBASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCC2Q8TAQ2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 AL118508.1-201ENST00000613502 2345 ntBASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SMARCC2Q8TAQ2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 AL590627.1-203ENST00000421194 1026 ntBASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 AC120114.3-201ENST00000611923 658 ntBASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 AC107918.4-202ENST00000641623 219 ntBASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMARCC2Q8TAQ2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20■□□□□ 0.79
SMARCC2Q8TAQ2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms