Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 HCG4P8-203ENST00000443049 980 ntBASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 MINOS1P3-201ENST00000457048 203 ntBASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 AP005901.3-202ENST00000581653 237 ntBASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP61Q8NHU2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.39■□□□□ 0.38
CFAP61Q8NHU2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP61Q8NHU2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP61Q8NHU2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CFAP61Q8NHU2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP61Q8NHU2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP61Q8NHU2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.39■□□□□ 0.38
CFAP61Q8NHU2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 AC005336.2-201ENST00000593183 939 ntBASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 AL603756.1-201ENST00000606511 2163 ntBASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CFAP61Q8NHU2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 KRT17P6-201ENST00000453795 1220 ntBASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 AC104819.1-201ENST00000504587 486 ntBASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP61Q8NHU2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms