Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 ACTL9-202ENST00000612068 1252 ntBASIC18.35■□□□□ 0.53
BEST2Q8NFU1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 FRMD8P1-201ENST00000440433 1524 ntBASIC18.34■□□□□ 0.53
BEST2Q8NFU1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 MCCD1P2-201ENST00000423228 335 ntBASIC18.34■□□□□ 0.53
BEST2Q8NFU1 AL513480.1-201ENST00000451731 511 ntBASIC18.34■□□□□ 0.53
BEST2Q8NFU1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 AC010327.4-202ENST00000591484 748 ntBASIC18.34■□□□□ 0.53
BEST2Q8NFU1 MTDHP5-201ENST00000598980 586 ntBASIC18.34■□□□□ 0.53
BEST2Q8NFU1 REXO1L3P-201ENST00000622202 1288 ntBASIC18.34■□□□□ 0.53
BEST2Q8NFU1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 AC092865.6-201ENST00000642101 219 ntBASIC18.34■□□□□ 0.53
BEST2Q8NFU1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST2Q8NFU1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.33■□□□□ 0.53
BEST2Q8NFU1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.33■□□□□ 0.53
BEST2Q8NFU1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 KRT19P2-202ENST00000557173 1012 ntBASIC18.33■□□□□ 0.52
BEST2Q8NFU1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 AL513190.1-201ENST00000621254 727 ntBASIC18.33■□□□□ 0.52
BEST2Q8NFU1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
BEST2Q8NFU1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 AC025580.3-201ENST00000617932 1424 ntBASIC18.32■□□□□ 0.52
BEST2Q8NFU1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST2Q8NFU1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms