Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 NORAD-201ENST00000565493 5339 ntBASIC14.84□□□□□ -0.03
BEST4Q8NFU0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST4Q8NFU0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
BEST4Q8NFU0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST4Q8NFU0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
BEST4Q8NFU0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST4Q8NFU0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST4Q8NFU0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BEST4Q8NFU0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 AL390955.1-201ENST00000428694 934 ntBASIC14.83□□□□□ -0.04
BEST4Q8NFU0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 LINC01311-201ENST00000565162 1445 ntBASIC14.83□□□□□ -0.04
BEST4Q8NFU0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST4Q8NFU0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AC092384.3-202ENST00000564646 2873 ntBASIC14.82□□□□□ -0.04
BEST4Q8NFU0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AL158047.1-201ENST00000445918 881 ntBASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
BEST4Q8NFU0 AL365203.3-201ENST00000609742 2057 ntBASIC14.81□□□□□ -0.04
BEST4Q8NFU0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
BEST4Q8NFU0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms