Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 SLC25A6P2-201ENST00000497974 877 ntBASIC17.51■□□□□ 0.39
RTL3Q8N8U3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 AC080080.1-201ENST00000625121 2420 ntBASIC17.51■□□□□ 0.39
RTL3Q8N8U3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 AC002310.6-201ENST00000624451 1377 ntBASIC17.51■□□□□ 0.39
RTL3Q8N8U3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL3Q8N8U3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 MRPL20P1-201ENST00000400819 433 ntBASIC17.5■□□□□ 0.39
RTL3Q8N8U3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 AC145285.3-201ENST00000564603 959 ntBASIC17.5■□□□□ 0.39
RTL3Q8N8U3 Z83851.2-201ENST00000609564 659 ntBASIC17.5■□□□□ 0.39
RTL3Q8N8U3 AC004790.2-201ENST00000623588 572 ntBASIC17.5■□□□□ 0.39
RTL3Q8N8U3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.5■□□□□ 0.39
RTL3Q8N8U3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.49■□□□□ 0.39
RTL3Q8N8U3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 PRSS29P-201ENST00000440800 595 ntBASIC17.49■□□□□ 0.39
RTL3Q8N8U3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 OR7E47P-204ENST00000575924 449 ntBASIC17.49■□□□□ 0.39
RTL3Q8N8U3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 AC120114.3-201ENST00000611923 658 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms