Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 FLJ13224-201ENST00000313737 1514 ntBASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 KRT18P32-201ENST00000424695 1287 ntBASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AC055876.3-201ENST00000431496 288 ntBASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AC093214.1-201ENST00000511688 1107 ntBASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 DUX4L27-201ENST00000554796 1261 ntBASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AL390955.2-201ENST00000603032 514 ntBASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AC138649.4-201ENST00000612222 287 ntBASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SYNPOQ8N3V7 AC134043.2-201ENST00000624206 2238 ntBASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 GNAS-203ENST00000306120 1878 ntBASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 AC020916.1-201ENST00000587762 1774 ntBASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SYNPOQ8N3V7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 AC243562.1-201ENST00000560672 389 ntBASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 AL139327.4-201ENST00000612362 153 ntBASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPOQ8N3V7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 TUBB3P1-201ENST00000405796 1332 ntBASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 AC107918.2-201ENST00000530817 355 ntBASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 KRT8P23-201ENST00000560090 1207 ntBASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYNPOQ8N3V7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms