Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR6080-201ENST00000617359 66 ntBASIC17.48■□□□□ 0.39
SIX5Q8N196 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SIX5Q8N196 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SIX5Q8N196 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SIX5Q8N196 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SIX5Q8N196 SERBP1P5-201ENST00000510079 1181 ntBASIC17.47■□□□□ 0.39
SIX5Q8N196 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.47■□□□□ 0.39
SIX5Q8N196 AC025048.6-201ENST00000634326 1161 ntBASIC17.47■□□□□ 0.39
SIX5Q8N196 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SIX5Q8N196 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX5Q8N196 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX5Q8N196 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SIX5Q8N196 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX5Q8N196 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SIX5Q8N196 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.47■□□□□ 0.39
SIX5Q8N196 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 AL135999.2-201ENST00000622438 1686 ntBASIC17.46■□□□□ 0.39
SIX5Q8N196 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.46■□□□□ 0.39
SIX5Q8N196 NME2P1-201ENST00000426182 414 ntBASIC17.46■□□□□ 0.39
SIX5Q8N196 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.46■□□□□ 0.39
SIX5Q8N196 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.46■□□□□ 0.39
SIX5Q8N196 AL596325.1-201ENST00000563991 1082 ntBASIC17.46■□□□□ 0.39
SIX5Q8N196 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.46■□□□□ 0.39
SIX5Q8N196 AL662799.1-202ENST00000614205 422 ntBASIC17.46■□□□□ 0.39
SIX5Q8N196 MIR6752-201ENST00000618442 71 ntBASIC17.46■□□□□ 0.39
SIX5Q8N196 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX5Q8N196 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX5Q8N196 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.46■□□□□ 0.39
SIX5Q8N196 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SIX5Q8N196 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
SIX5Q8N196 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.46■□□□□ 0.38
SIX5Q8N196 AL031598.1-201ENST00000561511 1773 ntBASIC17.45■□□□□ 0.38
SIX5Q8N196 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX5Q8N196 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SIX5Q8N196 AC073592.3-201ENST00000625118 1834 ntBASIC17.45■□□□□ 0.38
SIX5Q8N196 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX5Q8N196 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SIX5Q8N196 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms