Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 BX640515.1-201ENST00000617215 977 ntBASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 AC005593.1-201ENST00000624894 515 ntBASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 PGM5P2-202ENST00000637225 1043 ntBASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 PMS2P1-201ENST00000431037 1228 ntBASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 PAWRP1-201ENST00000451083 565 ntBASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 AL671883.3-201ENST00000603274 991 ntBASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 AC008667.4-201ENST00000607370 168 ntBASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCUBE3Q8IX30 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 IL9RP2-201ENST00000423948 1312 ntBASIC17.97■□□□□ 0.47
SCUBE3Q8IX30 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 AL590627.1-203ENST00000421194 1026 ntBASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 IGHV3-65-201ENST00000523210 341 ntBASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 UNC93B6-202ENST00000528242 690 ntBASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 AC120114.3-201ENST00000611923 658 ntBASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCUBE3Q8IX30 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SCUBE3Q8IX30 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SCUBE3Q8IX30 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SCUBE3Q8IX30 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms