Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VRK2Q86Y07 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
VRK2Q86Y07 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK2Q86Y07 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK2Q86Y07 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK2Q86Y07 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK2Q86Y07 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK2Q86Y07 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VRK2Q86Y07 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 PCDHB17P-201ENST00000539533 2393 ntBASIC15.83■□□□□ 0.12
VRK2Q86Y07 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 ACTG1P4-201ENST00000425123 1122 ntBASIC15.83■□□□□ 0.12
VRK2Q86Y07 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 AP001269.4-201ENST00000609611 512 ntBASIC15.83■□□□□ 0.12
VRK2Q86Y07 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 SIGLEC16-201ENST00000599858 1437 ntBASIC15.83■□□□□ 0.12
VRK2Q86Y07 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.83■□□□□ 0.12
VRK2Q86Y07 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 AC079776.2-201ENST00000641154 1609 ntBASIC15.83■□□□□ 0.12
VRK2Q86Y07 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK2Q86Y07 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 PCDHB19P-201ENST00000570871 2371 ntBASIC15.82■□□□□ 0.12
VRK2Q86Y07 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 KRT16P4-201ENST00000453883 522 ntBASIC15.82■□□□□ 0.12
VRK2Q86Y07 AC132008.2-207ENST00000454517 770 ntBASIC15.82■□□□□ 0.12
VRK2Q86Y07 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 FOSL1P1-201ENST00000511041 816 ntBASIC15.82■□□□□ 0.12
VRK2Q86Y07 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 TNRC18P3-201ENST00000441896 2691 ntBASIC15.82■□□□□ 0.12
VRK2Q86Y07 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK2Q86Y07 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK2Q86Y07 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VRK2Q86Y07 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK2Q86Y07 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VRK2Q86Y07 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VRK2Q86Y07 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VRK2Q86Y07 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VRK2Q86Y07 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK2Q86Y07 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VRK2Q86Y07 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VRK2Q86Y07 LINC00982-205ENST00000420957 435 ntBASIC15.81■□□□□ 0.12
VRK2Q86Y07 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.81■□□□□ 0.12
VRK2Q86Y07 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms