Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 AC027612.4-201ENST00000605371 583 ntBASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 AC099522.2-201ENST00000607001 744 ntBASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBE3BQ7Z3V4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 AC092053.1-201ENST00000605787 1936 ntBASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 LINC02012-201ENST00000608206 1725 ntBASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 TOP3BP1-201ENST00000420768 1380 ntBASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
UBE3BQ7Z3V4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 AL353732.1-201ENST00000569618 1459 ntBASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 AC012569.1-201ENST00000591191 1524 ntBASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 AL513210.1-201ENST00000629608 234 ntBASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 KRT18P28-201ENST00000453838 1332 ntBASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.21■□□□□ 0.99
UBE3BQ7Z3V4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
UBE3BQ7Z3V4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
UBE3BQ7Z3V4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 AC002056.1-201ENST00000395613 760 ntBASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 METTL21AP1-201ENST00000438852 635 ntBASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
UBE3BQ7Z3V4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms