Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AC023141.5-201ENST00000458585 616 ntBASIC21.46■■□□□ 1.03
COPS6Q7L5N1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.46■■□□□ 1.03
COPS6Q7L5N1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COPS6Q7L5N1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.45■■□□□ 1.03
COPS6Q7L5N1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COPS6Q7L5N1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COPS6Q7L5N1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AL627223.1-201ENST00000416693 442 ntBASIC21.45■■□□□ 1.02
COPS6Q7L5N1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AC004449.1-201ENST00000564240 433 ntBASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AL135744.1-201ENST00000565098 629 ntBASIC21.45■■□□□ 1.02
COPS6Q7L5N1 RARRES2P8-201ENST00000566335 367 ntBASIC21.45■■□□□ 1.02
COPS6Q7L5N1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AC091167.2-201ENST00000579581 588 ntBASIC21.45■■□□□ 1.02
COPS6Q7L5N1 MPDU1-223ENST00000582151 728 ntBASIC21.45■■□□□ 1.02
COPS6Q7L5N1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 LINC00896-202ENST00000609602 2128 ntBASIC21.45■■□□□ 1.02
COPS6Q7L5N1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPS6Q7L5N1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 AL592309.1-201ENST00000443127 649 ntBASIC21.44■■□□□ 1.02
COPS6Q7L5N1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COPS6Q7L5N1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 LINC02012-201ENST00000608206 1725 ntBASIC21.43■■□□□ 1.02
COPS6Q7L5N1 AC092053.1-201ENST00000605787 1936 ntBASIC21.43■■□□□ 1.02
COPS6Q7L5N1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COPS6Q7L5N1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms