Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 GGTLC5P-201ENST00000617623 998 ntBASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 PI4KAP1-204ENST00000612579 1703 ntBASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PPP4R3AQ6IN85 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 BX640515.1-201ENST00000617215 977 ntBASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP4R3AQ6IN85 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 AC079776.4-201ENST00000511039 504 ntBASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 DUX4L17-201ENST00000557360 1267 ntBASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP4R3AQ6IN85 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms