Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.57■□□□□ 0.4
ALFQ53S48 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.57■□□□□ 0.4
ALFQ53S48 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.57■□□□□ 0.4
ALFQ53S48 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
ALFQ53S48 MRPL20P1-201ENST00000400819 433 ntBASIC17.57■□□□□ 0.4
ALFQ53S48 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.57■□□□□ 0.4
ALFQ53S48 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ALFQ53S48 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.57■□□□□ 0.4
ALFQ53S48 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.57■□□□□ 0.4
ALFQ53S48 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.57■□□□□ 0.4
ALFQ53S48 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.57■□□□□ 0.4
ALFQ53S48 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ALFQ53S48 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ALFQ53S48 AP001094.4-201ENST00000579008 2176 ntBASIC17.57■□□□□ 0.4
ALFQ53S48 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.57■□□□□ 0.4
ALFQ53S48 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALFQ53S48 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
ALFQ53S48 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
ALFQ53S48 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.56■□□□□ 0.4
ALFQ53S48 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ALFQ53S48 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
ALFQ53S48 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
ALFQ53S48 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ALFQ53S48 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.56■□□□□ 0.4
ALFQ53S48 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ALFQ53S48 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.56■□□□□ 0.4
ALFQ53S48 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.56■□□□□ 0.4
ALFQ53S48 VN2R19P-201ENST00000442399 1052 ntBASIC17.56■□□□□ 0.4
ALFQ53S48 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.56■□□□□ 0.4
ALFQ53S48 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.56■□□□□ 0.4
ALFQ53S48 AC140113.2-201ENST00000604370 208 ntBASIC17.56■□□□□ 0.4
ALFQ53S48 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.56■□□□□ 0.4
ALFQ53S48 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.56■□□□□ 0.4
ALFQ53S48 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ALFQ53S48 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALFQ53S48 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ALFQ53S48 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 AC002310.6-201ENST00000624451 1377 ntBASIC17.55■□□□□ 0.4
ALFQ53S48 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ALFQ53S48 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.55■□□□□ 0.4
ALFQ53S48 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ALFQ53S48 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 MIR940-201ENST00000401276 94 ntBASIC17.55■□□□□ 0.4
ALFQ53S48 IGLL3P-201ENST00000412472 434 ntBASIC17.55■□□□□ 0.4
ALFQ53S48 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.55■□□□□ 0.4
ALFQ53S48 PRSS29P-201ENST00000440800 595 ntBASIC17.55■□□□□ 0.4
ALFQ53S48 POLD2P1-201ENST00000511220 997 ntBASIC17.55■□□□□ 0.4
ALFQ53S48 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ALFQ53S48 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.55■□□□□ 0.4
ALFQ53S48 AC010654.1-201ENST00000615722 808 ntBASIC17.55■□□□□ 0.4
ALFQ53S48 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.55■□□□□ 0.4
ALFQ53S48 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms