Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KHDC1Q4VXA5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC133963.1-201ENST00000504166 1679 ntBASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC004870.1-201ENST00000315132 882 ntBASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC073592.5-201ENST00000624854 528 ntBASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
KHDC1Q4VXA5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 RBM17P3-201ENST00000417687 1192 ntBASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 AC002558.1-201ENST00000488906 803 ntBASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 AC004817.3-201ENST00000602957 2129 ntBASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.35■□□□□ 0.37
KHDC1Q4VXA5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms