Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USH1GQ495M9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USH1GQ495M9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USH1GQ495M9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
USH1GQ495M9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.58■□□□□ 0.72
USH1GQ495M9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USH1GQ495M9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.57■□□□□ 0.72
USH1GQ495M9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.57■□□□□ 0.72
USH1GQ495M9 CEND1P1-201ENST00000451006 455 ntBASIC19.57■□□□□ 0.72
USH1GQ495M9 YBX1P5-201ENST00000509441 847 ntBASIC19.57■□□□□ 0.72
USH1GQ495M9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.57■□□□□ 0.72
USH1GQ495M9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 AP001160.2-201ENST00000596071 487 ntBASIC19.57■□□□□ 0.72
USH1GQ495M9 AC068137.2-201ENST00000605408 478 ntBASIC19.57■□□□□ 0.72
USH1GQ495M9 AC091812.2-201ENST00000619081 385 ntBASIC19.57■□□□□ 0.72
USH1GQ495M9 REXO1L3P-201ENST00000622202 1288 ntBASIC19.57■□□□□ 0.72
USH1GQ495M9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
USH1GQ495M9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.57■□□□□ 0.72
USH1GQ495M9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
USH1GQ495M9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.57■□□□□ 0.72
USH1GQ495M9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USH1GQ495M9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.56■□□□□ 0.72
USH1GQ495M9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.56■□□□□ 0.72
USH1GQ495M9 AC141586.5-201ENST00000624546 2050 ntBASIC19.56■□□□□ 0.72
USH1GQ495M9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USH1GQ495M9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.56■□□□□ 0.72
USH1GQ495M9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 AL031432.2-201ENST00000566714 459 ntBASIC19.56■□□□□ 0.72
USH1GQ495M9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
USH1GQ495M9 AL928711.1-201ENST00000570165 459 ntBASIC19.56■□□□□ 0.72
USH1GQ495M9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.56■□□□□ 0.72
USH1GQ495M9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
USH1GQ495M9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.56■□□□□ 0.72
USH1GQ495M9 AC005332.8-201ENST00000622750 2735 ntBASIC19.56■□□□□ 0.72
USH1GQ495M9 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USH1GQ495M9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USH1GQ495M9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
USH1GQ495M9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.55■□□□□ 0.72
USH1GQ495M9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 ELL2P1-201ENST00000413990 1906 ntBASIC19.55■□□□□ 0.72
USH1GQ495M9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USH1GQ495M9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.55■□□□□ 0.72
USH1GQ495M9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USH1GQ495M9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms