Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM71Q2Q1W2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 SPDYE7P-202ENST00000420373 878 ntBASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 AC027307.2-201ENST00000591252 911 ntBASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 AL158211.3-201ENST00000607385 239 ntBASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM71Q2Q1W2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM71Q2Q1W2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM71Q2Q1W2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM71Q2Q1W2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM71Q2Q1W2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM71Q2Q1W2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 AC097493.3-201ENST00000509725 367 ntBASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 AC087641.1-201ENST00000557561 1021 ntBASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 AL390754.1-201ENST00000619088 582 ntBASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM71Q2Q1W2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 AC092580.3-201ENST00000430932 139 ntBASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM71Q2Q1W2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms