Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 KRT8P49-201ENST00000604166 1432 ntBASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 LAGE3P1-201ENST00000425356 484 ntBASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 AL391256.1-201ENST00000443260 1855 ntBASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 AL021920.2-201ENST00000624828 1351 ntBASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO1Q2MKA7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 ELK2BP-201ENST00000415014 1224 ntBASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 AC079781.3-201ENST00000449110 356 ntBASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 FAM197Y8-203ENST00000450145 560 ntBASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 AC018712.1-201ENST00000455767 687 ntBASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 RN7SL510P-201ENST00000581311 263 ntBASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 AC104692.2-201ENST00000603054 253 ntBASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 AC148477.8-201ENST00000624298 468 ntBASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO1Q2MKA7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 AC087163.2-201ENST00000457299 853 ntBASIC14.76□□□□□ -0.05
RSPO1Q2MKA7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms