Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH17Q12864 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH17Q12864 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CDH17Q12864 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 RNF216P1-203ENST00000404404 2427 ntBASIC17.28■□□□□ 0.36
CDH17Q12864 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH17Q12864 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH17Q12864 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 AP002414.1-201ENST00000391405 1147 ntBASIC17.28■□□□□ 0.36
CDH17Q12864 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH17Q12864 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH17Q12864 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH17Q12864 AP002490.2-201ENST00000524791 560 ntBASIC17.28■□□□□ 0.36
CDH17Q12864 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.28■□□□□ 0.36
CDH17Q12864 AL355877.3-201ENST00000622820 899 ntBASIC17.28■□□□□ 0.36
CDH17Q12864 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH17Q12864 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDH17Q12864 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH17Q12864 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH17Q12864 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.28■□□□□ 0.36
CDH17Q12864 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH17Q12864 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDH17Q12864 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 AL590787.1-201ENST00000568856 1315 ntBASIC17.27■□□□□ 0.36
CDH17Q12864 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.27■□□□□ 0.36
CDH17Q12864 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH17Q12864 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.27■□□□□ 0.36
CDH17Q12864 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.27■□□□□ 0.36
CDH17Q12864 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH17Q12864 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH17Q12864 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CDH17Q12864 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH17Q12864 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.27■□□□□ 0.35
CDH17Q12864 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH17Q12864 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH17Q12864 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDH17Q12864 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.27■□□□□ 0.35
CDH17Q12864 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.27■□□□□ 0.35
CDH17Q12864 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CDH17Q12864 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH17Q12864 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH17Q12864 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH17Q12864 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH17Q12864 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH17Q12864 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH17Q12864 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH17Q12864 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH17Q12864 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CDH17Q12864 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH17Q12864 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH17Q12864 AC064862.7-201ENST00000604520 867 ntBASIC17.26■□□□□ 0.35
CDH17Q12864 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 AL589182.2-201ENST00000619332 1049 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms