Protein–RNA interactions for Protein: P69905

HBA1, Hemoglobin subunit alpha, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1P69905 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.12■□□□□ 0.17
HBA1P69905 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.12■□□□□ 0.17
HBA1P69905 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HBA1P69905 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HBA1P69905 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HBA1P69905 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.12■□□□□ 0.17
HBA1P69905 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HBA1P69905 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HBA1P69905 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HBA1P69905 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HBA1P69905 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
HBA1P69905 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HBA1P69905 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HBA1P69905 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
HBA1P69905 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.11■□□□□ 0.17
HBA1P69905 AC138894.3-201ENST00000603787 634 ntBASIC16.11■□□□□ 0.17
HBA1P69905 AL591684.3-201ENST00000605187 298 ntBASIC16.11■□□□□ 0.17
HBA1P69905 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HBA1P69905 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HBA1P69905 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HBA1P69905 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HBA1P69905 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 ARMC10P1-201ENST00000313754 855 ntBASIC16.1■□□□□ 0.17
HBA1P69905 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.1■□□□□ 0.17
HBA1P69905 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 LINC00982-205ENST00000420957 435 ntBASIC16.1■□□□□ 0.17
HBA1P69905 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.1■□□□□ 0.17
HBA1P69905 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.1■□□□□ 0.17
HBA1P69905 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HBA1P69905 AC093458.2-201ENST00000623150 629 ntBASIC16.1■□□□□ 0.17
HBA1P69905 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.1■□□□□ 0.17
HBA1P69905 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HBA1P69905 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 TUBB8P12-201ENST00000308911 1335 ntBASIC16.1■□□□□ 0.17
HBA1P69905 TUBB7P-202ENST00000428444 1305 ntBASIC16.1■□□□□ 0.17
HBA1P69905 TUBB8P7-204ENST00000567960 1332 ntBASIC16.1■□□□□ 0.17
HBA1P69905 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HBA1P69905 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HBA1P69905 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms