Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CDC34P49427 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 AC092338.2-201ENST00000568827 1415 ntBASIC13.56□□□□□ -0.24
CDC34P49427 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
CDC34P49427 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CDC34P49427 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC34P49427 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC34P49427 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC34P49427 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC34P49427 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
CDC34P49427 FAM197Y4-202ENST00000622692 608 ntBASIC13.56□□□□□ -0.24
CDC34P49427 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.56□□□□□ -0.24
CDC34P49427 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC34P49427 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC34P49427 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC34P49427 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC34P49427 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CDC34P49427 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC34P49427 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 AC128676.1-201ENST00000454392 318 ntBASIC13.55□□□□□ -0.24
CDC34P49427 AC112698.1-201ENST00000510299 916 ntBASIC13.55□□□□□ -0.24
CDC34P49427 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 REXO1L10P-201ENST00000615707 1290 ntBASIC13.55□□□□□ -0.24
CDC34P49427 REXO1L12P-201ENST00000622156 912 ntBASIC13.55□□□□□ -0.24
CDC34P49427 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC34P49427 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC34P49427 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC34P49427 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.55□□□□□ -0.24
CDC34P49427 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC34P49427 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC34P49427 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC34P49427 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms