Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.25■□□□□ 0.83
TNNI2P48788 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.25■□□□□ 0.83
TNNI2P48788 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.25■□□□□ 0.83
TNNI2P48788 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.25■□□□□ 0.83
TNNI2P48788 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TNNI2P48788 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TNNI2P48788 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 IGHV3-62-201ENST00000520057 340 ntBASIC20.25■□□□□ 0.83
TNNI2P48788 AC069262.1-201ENST00000539058 672 ntBASIC20.25■□□□□ 0.83
TNNI2P48788 AC138761.1-201ENST00000584393 385 ntBASIC20.25■□□□□ 0.83
TNNI2P48788 AP001059.3-201ENST00000619053 235 ntBASIC20.25■□□□□ 0.83
TNNI2P48788 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.25■□□□□ 0.83
TNNI2P48788 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.25■□□□□ 0.83
TNNI2P48788 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.25■□□□□ 0.83
TNNI2P48788 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.25■□□□□ 0.83
TNNI2P48788 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TNNI2P48788 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TNNI2P48788 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TNNI2P48788 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.24■□□□□ 0.83
TNNI2P48788 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNNI2P48788 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TNNI2P48788 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.24■□□□□ 0.83
TNNI2P48788 AC012569.1-201ENST00000591191 1524 ntBASIC20.24■□□□□ 0.83
TNNI2P48788 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.24■□□□□ 0.83
TNNI2P48788 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNNI2P48788 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TNNI2P48788 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TNNI2P48788 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNNI2P48788 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 HMGA1P7-201ENST00000406908 502 ntBASIC20.24■□□□□ 0.83
TNNI2P48788 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.24■□□□□ 0.83
TNNI2P48788 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.24■□□□□ 0.83
TNNI2P48788 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.24■□□□□ 0.83
TNNI2P48788 AC239800.4-201ENST00000603712 296 ntBASIC20.24■□□□□ 0.83
TNNI2P48788 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.24■□□□□ 0.83
TNNI2P48788 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.24■□□□□ 0.83
TNNI2P48788 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNNI2P48788 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.24■□□□□ 0.83
TNNI2P48788 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.23■□□□□ 0.83
TNNI2P48788 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TNNI2P48788 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNNI2P48788 AC008764.6-201ENST00000595909 2069 ntBASIC20.23■□□□□ 0.83
TNNI2P48788 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TNNI2P48788 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.23■□□□□ 0.83
TNNI2P48788 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TNNI2P48788 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.23■□□□□ 0.83
TNNI2P48788 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.23■□□□□ 0.83
TNNI2P48788 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.23■□□□□ 0.83
TNNI2P48788 INGX-202ENST00000489074 768 ntBASIC20.23■□□□□ 0.83
TNNI2P48788 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.23■□□□□ 0.83
TNNI2P48788 AC051619.7-201ENST00000568314 623 ntBASIC20.23■□□□□ 0.83
TNNI2P48788 AL390955.2-201ENST00000603032 514 ntBASIC20.23■□□□□ 0.83
TNNI2P48788 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.23■□□□□ 0.83
TNNI2P48788 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.23■□□□□ 0.83
TNNI2P48788 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.23■□□□□ 0.83
TNNI2P48788 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.23■□□□□ 0.83
TNNI2P48788 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.23■□□□□ 0.83
TNNI2P48788 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 TUBB3P1-201ENST00000405796 1332 ntBASIC20.23■□□□□ 0.83
TNNI2P48788 LYSMD4-203ENST00000378904 2122 ntBASIC20.23■□□□□ 0.83
TNNI2P48788 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNNI2P48788 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI2P48788 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI2P48788 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI2P48788 LINC00304-203ENST00000565008 1864 ntBASIC20.22■□□□□ 0.83
TNNI2P48788 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI2P48788 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI2P48788 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.22■□□□□ 0.83
TNNI2P48788 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms