Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
KRT20P35900 COX5BP2-201ENST00000392354 334 ntBASIC16.33■□□□□ 0.2
KRT20P35900 IGHV3-47-201ENST00000425060 335 ntBASIC16.33■□□□□ 0.2
KRT20P35900 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT20P35900 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 AC138894.3-201ENST00000603787 634 ntBASIC16.33■□□□□ 0.2
KRT20P35900 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
KRT20P35900 TP73-AS1-210ENST00000637775 1455 ntBASIC16.33■□□□□ 0.2
KRT20P35900 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT20P35900 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT20P35900 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 NUS1P2-201ENST00000417358 873 ntBASIC16.32■□□□□ 0.2
KRT20P35900 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT20P35900 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT20P35900 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT20P35900 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 AC010460.3-201ENST00000511359 1579 ntBASIC16.32■□□□□ 0.2
KRT20P35900 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT20P35900 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT20P35900 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT20P35900 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.32■□□□□ 0.2
KRT20P35900 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 LINC01451-201ENST00000623792 534 ntBASIC16.32■□□□□ 0.2
KRT20P35900 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KRT20P35900 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT20P35900 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT20P35900 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT20P35900 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT20P35900 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT20P35900 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KRT20P35900 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 HLA-J-201ENST00000462773 1622 ntBASIC16.31■□□□□ 0.2
KRT20P35900 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT20P35900 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT20P35900 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 AC103564.2-201ENST00000432853 1299 ntBASIC16.31■□□□□ 0.2
KRT20P35900 AC122714.2-201ENST00000502787 707 ntBASIC16.31■□□□□ 0.2
KRT20P35900 IGHV3-52-201ENST00000519770 353 ntBASIC16.31■□□□□ 0.2
KRT20P35900 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT20P35900 AC111152.3-201ENST00000569699 673 ntBASIC16.31■□□□□ 0.2
KRT20P35900 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.31■□□□□ 0.2
KRT20P35900 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT20P35900 LINC01711-201ENST00000598340 967 ntBASIC16.31■□□□□ 0.2
KRT20P35900 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT20P35900 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms