Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXA11P31270 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXA11P31270 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HOXA11P31270 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA11P31270 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA11P31270 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA11P31270 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 TSEN15P1-201ENST00000423257 515 ntBASIC18.36■□□□□ 0.53
HOXA11P31270 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 HMGN1P19-201ENST00000436976 333 ntBASIC18.36■□□□□ 0.53
HOXA11P31270 HLA-J-203ENST00000494367 1087 ntBASIC18.36■□□□□ 0.53
HOXA11P31270 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 AC079140.1-201ENST00000508039 487 ntBASIC18.36■□□□□ 0.53
HOXA11P31270 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HOXA11P31270 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXA11P31270 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXA11P31270 AC087641.1-201ENST00000557561 1021 ntBASIC18.36■□□□□ 0.53
HOXA11P31270 AC108860.2-201ENST00000562760 2183 ntBASIC18.36■□□□□ 0.53
HOXA11P31270 RARRES2P8-201ENST00000566335 367 ntBASIC18.36■□□□□ 0.53
HOXA11P31270 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXA11P31270 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXA11P31270 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXA11P31270 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HOXA11P31270 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.35■□□□□ 0.53
HOXA11P31270 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXA11P31270 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 AKAP8P1-201ENST00000434743 1349 ntBASIC18.35■□□□□ 0.53
HOXA11P31270 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HOXA11P31270 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HOXA11P31270 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXA11P31270 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXA11P31270 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HOXA11P31270 AL135744.1-201ENST00000565098 629 ntBASIC18.35■□□□□ 0.53
HOXA11P31270 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 AL161645.1-201ENST00000622716 1255 ntBASIC18.35■□□□□ 0.53
HOXA11P31270 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXA11P31270 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXA11P31270 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HOXA11P31270 AC139713.2-201ENST00000641328 2723 ntBASIC18.35■□□□□ 0.53
HOXA11P31270 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXA11P31270 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HOXA11P31270 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.34■□□□□ 0.53
HOXA11P31270 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HOXA11P31270 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXA11P31270 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HOXA11P31270 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXA11P31270 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HOXA11P31270 AL627223.1-201ENST00000416693 442 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms