Protein–RNA interactions for Protein: P31268

HOXA7, Homeobox protein Hox-A7, humanhuman

Predicted RBP Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA7P31268 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXA7P31268 AC005237.2-201ENST00000434368 219 ntBASIC19.76■□□□□ 0.75
HOXA7P31268 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXA7P31268 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA7P31268 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA7P31268 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HOXA7P31268 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA7P31268 Z92544.3-201ENST00000624747 417 ntBASIC19.76■□□□□ 0.75
HOXA7P31268 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA7P31268 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA7P31268 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA7P31268 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA7P31268 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HOXA7P31268 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.75■□□□□ 0.75
HOXA7P31268 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA7P31268 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.75■□□□□ 0.75
HOXA7P31268 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HOXA7P31268 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HOXA7P31268 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA7P31268 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA7P31268 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA7P31268 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA7P31268 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXA7P31268 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA7P31268 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HOXA7P31268 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HOXA7P31268 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXA7P31268 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 AC005332.8-201ENST00000622750 2735 ntBASIC19.74■□□□□ 0.75
HOXA7P31268 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HOXA7P31268 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA7P31268 HMGA1P7-201ENST00000406908 502 ntBASIC19.74■□□□□ 0.75
HOXA7P31268 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA7P31268 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA7P31268 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA7P31268 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA7P31268 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA7P31268 RARRES2P8-201ENST00000566335 367 ntBASIC19.74■□□□□ 0.75
HOXA7P31268 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA7P31268 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA7P31268 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
HOXA7P31268 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA7P31268 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA7P31268 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA7P31268 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA7P31268 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA7P31268 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA7P31268 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA7P31268 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA7P31268 FAM58DP-201ENST00000428076 619 ntBASIC19.73■□□□□ 0.75
HOXA7P31268 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA7P31268 RNA5SP421-201ENST00000516864 134 ntBASIC19.73■□□□□ 0.75
HOXA7P31268 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXA7P31268 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA7P31268 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXA7P31268 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA7P31268 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms