Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.86□□□□□ -0.03
HLA-DMAP28067 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 AC090192.1-201ENST00000517740 490 ntBASIC14.86□□□□□ -0.03
HLA-DMAP28067 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 REXO1L10P-201ENST00000615707 1290 ntBASIC14.86□□□□□ -0.03
HLA-DMAP28067 REXO1L12P-201ENST00000622156 912 ntBASIC14.86□□□□□ -0.03
HLA-DMAP28067 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DMAP28067 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DMAP28067 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 AL009178.2-201ENST00000597278 2719 ntBASIC14.85□□□□□ -0.03
HLA-DMAP28067 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DMAP28067 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DMAP28067 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 LINC01311-201ENST00000565162 1445 ntBASIC14.84□□□□□ -0.03
HLA-DMAP28067 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms