Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 BTBD7P1-201ENST00000447253 1453 ntBASIC20.71■□□□□ 0.91
KCNA3P22001 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNA3P22001 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
KCNA3P22001 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNA3P22001 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
KCNA3P22001 SLC25A6P5-201ENST00000435663 894 ntBASIC20.71■□□□□ 0.91
KCNA3P22001 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNA3P22001 RN7SL837P-201ENST00000463010 287 ntBASIC20.71■□□□□ 0.91
KCNA3P22001 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNA3P22001 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNA3P22001 REXO1L6P-201ENST00000603433 1515 ntBASIC20.71■□□□□ 0.91
KCNA3P22001 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNA3P22001 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA3P22001 LINC00895-201ENST00000629028 1637 ntBASIC20.71■□□□□ 0.91
KCNA3P22001 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
KCNA3P22001 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
KCNA3P22001 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNA3P22001 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNA3P22001 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNA3P22001 FLJ13224-201ENST00000313737 1514 ntBASIC20.7■□□□□ 0.9
KCNA3P22001 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNA3P22001 SPDYE19P-201ENST00000338590 713 ntBASIC20.7■□□□□ 0.9
KCNA3P22001 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNA3P22001 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KCNA3P22001 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNA3P22001 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNA3P22001 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KCNA3P22001 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.7■□□□□ 0.9
KCNA3P22001 AC092552.1-201ENST00000547243 906 ntBASIC20.7■□□□□ 0.9
KCNA3P22001 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNA3P22001 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.7■□□□□ 0.9
KCNA3P22001 LINC00896-202ENST00000609602 2128 ntBASIC20.7■□□□□ 0.9
KCNA3P22001 SPTSSB-204ENST00000617024 1292 ntBASIC20.7■□□□□ 0.9
KCNA3P22001 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNA3P22001 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNA3P22001 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNA3P22001 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
KCNA3P22001 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNA3P22001 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNA3P22001 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNA3P22001 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 HLA-H-201ENST00000383620 1096 ntBASIC20.69■□□□□ 0.9
KCNA3P22001 AL080243.2-201ENST00000418783 582 ntBASIC20.69■□□□□ 0.9
KCNA3P22001 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNA3P22001 MTND6P24-201ENST00000440466 518 ntBASIC20.69■□□□□ 0.9
KCNA3P22001 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNA3P22001 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.69■□□□□ 0.9
KCNA3P22001 MIR4525-201ENST00000580000 75 ntBASIC20.69■□□□□ 0.9
KCNA3P22001 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.69■□□□□ 0.9
KCNA3P22001 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNA3P22001 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNA3P22001 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNA3P22001 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNA3P22001 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
KCNA3P22001 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.68■□□□□ 0.9
KCNA3P22001 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KCNA3P22001 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KCNA3P22001 SPDYE18-201ENST00000510091 1050 ntBASIC20.68■□□□□ 0.9
KCNA3P22001 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNA3P22001 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNA3P22001 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
KCNA3P22001 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNA3P22001 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms