Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 AC006557.2-201ENST00000592985 1240 ntBASIC17.28■□□□□ 0.36
HLA-DPA1P20036 AC107918.4-202ENST00000641623 219 ntBASIC17.28■□□□□ 0.36
HLA-DPA1P20036 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 AP002414.1-201ENST00000391405 1147 ntBASIC17.27■□□□□ 0.36
HLA-DPA1P20036 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 TP73-AS1-207ENST00000624167 988 ntBASIC17.27■□□□□ 0.36
HLA-DPA1P20036 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPA1P20036 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.27■□□□□ 0.35
HLA-DPA1P20036 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPA1P20036 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HLA-DPA1P20036 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPA1P20036 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPA1P20036 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPA1P20036 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.26■□□□□ 0.35
HLA-DPA1P20036 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 RNPS1P1-201ENST00000507437 918 ntBASIC17.26■□□□□ 0.35
HLA-DPA1P20036 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DPA1P20036 AD000864.1-201ENST00000624076 2295 ntBASIC17.26■□□□□ 0.35
HLA-DPA1P20036 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms