Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BMP3P12645 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 AC004461.1-201ENST00000412461 403 ntBASIC19.64■□□□□ 0.73
BMP3P12645 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
BMP3P12645 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BMP3P12645 AC027796.2-201ENST00000575326 344 ntBASIC19.64■□□□□ 0.73
BMP3P12645 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
BMP3P12645 AC022145.2-201ENST00000598203 171 ntBASIC19.64■□□□□ 0.73
BMP3P12645 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.64■□□□□ 0.73
BMP3P12645 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
BMP3P12645 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.64■□□□□ 0.73
BMP3P12645 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
BMP3P12645 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BMP3P12645 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.63■□□□□ 0.73
BMP3P12645 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 SLC22A20-204ENST00000530038 1673 ntBASIC19.63■□□□□ 0.73
BMP3P12645 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.63■□□□□ 0.73
BMP3P12645 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.63■□□□□ 0.73
BMP3P12645 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
BMP3P12645 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.63■□□□□ 0.73
BMP3P12645 AL355306.1-201ENST00000415580 579 ntBASIC19.63■□□□□ 0.73
BMP3P12645 HCG4-201ENST00000418983 998 ntBASIC19.63■□□□□ 0.73
BMP3P12645 AL671277.1-201ENST00000429656 993 ntBASIC19.63■□□□□ 0.73
BMP3P12645 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.63■□□□□ 0.73
BMP3P12645 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.63■□□□□ 0.73
BMP3P12645 AC091167.2-201ENST00000579581 588 ntBASIC19.63■□□□□ 0.73
BMP3P12645 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.63■□□□□ 0.73
BMP3P12645 AC004835.2-201ENST00000603762 682 ntBASIC19.63■□□□□ 0.73
BMP3P12645 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.63■□□□□ 0.73
BMP3P12645 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.63■□□□□ 0.73
BMP3P12645 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.63■□□□□ 0.73
BMP3P12645 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BMP3P12645 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.63■□□□□ 0.73
BMP3P12645 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP3P12645 LINC00896-202ENST00000609602 2128 ntBASIC19.63■□□□□ 0.73
BMP3P12645 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BMP3P12645 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
BMP3P12645 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
BMP3P12645 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.62■□□□□ 0.73
BMP3P12645 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
BMP3P12645 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BMP3P12645 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BMP3P12645 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BMP3P12645 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.62■□□□□ 0.73
BMP3P12645 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.62■□□□□ 0.73
BMP3P12645 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.62■□□□□ 0.73
BMP3P12645 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BMP3P12645 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 LINC02012-201ENST00000608206 1725 ntBASIC19.62■□□□□ 0.73
BMP3P12645 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.62■□□□□ 0.73
BMP3P12645 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.62■□□□□ 0.73
BMP3P12645 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP3P12645 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.61■□□□□ 0.73
BMP3P12645 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP3P12645 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
BMP3P12645 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP3P12645 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.61■□□□□ 0.73
BMP3P12645 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP3P12645 TIMM8BP1-201ENST00000452384 211 ntBASIC19.61■□□□□ 0.73
BMP3P12645 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.61■□□□□ 0.73
BMP3P12645 FAM86C2P-203ENST00000528684 1004 ntBASIC19.61■□□□□ 0.73
BMP3P12645 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP3P12645 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms