Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TOP1P11387 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.08■□□□□ 0.81
TOP1P11387 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TOP1P11387 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TOP1P11387 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.08■□□□□ 0.81
TOP1P11387 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TOP1P11387 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TOP1P11387 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TOP1P11387 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TOP1P11387 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TOP1P11387 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TOP1P11387 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TOP1P11387 SLC25A1P3-201ENST00000395415 828 ntBASIC20.08■□□□□ 0.81
TOP1P11387 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
TOP1P11387 HCG4B-203ENST00000450128 991 ntBASIC20.08■□□□□ 0.81
TOP1P11387 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.08■□□□□ 0.81
TOP1P11387 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
TOP1P11387 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.08■□□□□ 0.81
TOP1P11387 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.08■□□□□ 0.81
TOP1P11387 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TOP1P11387 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.08■□□□□ 0.8
TOP1P11387 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TOP1P11387 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TOP1P11387 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TOP1P11387 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TOP1P11387 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TOP1P11387 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TOP1P11387 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 AC141586.5-201ENST00000624546 2050 ntBASIC20.07■□□□□ 0.8
TOP1P11387 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.07■□□□□ 0.8
TOP1P11387 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TOP1P11387 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TOP1P11387 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TOP1P11387 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.07■□□□□ 0.8
TOP1P11387 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.07■□□□□ 0.8
TOP1P11387 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TOP1P11387 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TOP1P11387 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TOP1P11387 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TOP1P11387 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.07■□□□□ 0.8
TOP1P11387 KRT18P2-201ENST00000447938 1258 ntBASIC20.07■□□□□ 0.8
TOP1P11387 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.07■□□□□ 0.8
TOP1P11387 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TOP1P11387 AC106820.2-201ENST00000563775 3264 ntBASIC20.07■□□□□ 0.8
TOP1P11387 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TOP1P11387 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TOP1P11387 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TOP1P11387 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.06■□□□□ 0.8
TOP1P11387 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.06■□□□□ 0.8
TOP1P11387 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.06■□□□□ 0.8
TOP1P11387 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TOP1P11387 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TOP1P11387 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TOP1P11387 AC023511.2-201ENST00000618803 211 ntBASIC20.06■□□□□ 0.8
TOP1P11387 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.06■□□□□ 0.8
TOP1P11387 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.06■□□□□ 0.8
TOP1P11387 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.06■□□□□ 0.8
TOP1P11387 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TOP1P11387 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.06■□□□□ 0.8
TOP1P11387 AC116353.5-201ENST00000638148 1699 ntBASIC20.06■□□□□ 0.8
TOP1P11387 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TOP1P11387 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.06■□□□□ 0.8
TOP1P11387 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.05■□□□□ 0.8
TOP1P11387 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.05■□□□□ 0.8
TOP1P11387 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TOP1P11387 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
TOP1P11387 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.05■□□□□ 0.8
TOP1P11387 IGLL3P-201ENST00000412472 434 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms