Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 KRT18P38-201ENST00000449496 1282 ntBASIC15.53■□□□□ 0.08
HMGN1P05114 STK19B-204ENST00000512515 211 ntBASIC15.53■□□□□ 0.08
HMGN1P05114 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 AL138831.2-201ENST00000606564 490 ntBASIC15.53■□□□□ 0.08
HMGN1P05114 HYMAI.1-201ENST00000620949 238 ntBASIC15.53■□□□□ 0.08
HMGN1P05114 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HMGN1P05114 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HMGN1P05114 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HMGN1P05114 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGN1P05114 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 TUBB8P12-201ENST00000308911 1335 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 TUBB7P-202ENST00000428444 1305 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 TUBB8P7-204ENST00000567960 1332 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 PCDH8P1-201ENST00000428983 2773 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
HMGN1P05114 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 TERF1P1-201ENST00000311003 1181 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMGN1P05114 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
HMGN1P05114 AL596275.1-201ENST00000423464 877 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGN1P05114 RN7SL606P-201ENST00000472779 293 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.52■□□□□ 0.08
HMGN1P05114 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGN1P05114 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGN1P05114 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGN1P05114 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGN1P05114 AL353801.3-201ENST00000609898 542 ntBASIC15.52■□□□□ 0.08
HMGN1P05114 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGN1P05114 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGN1P05114 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGN1P05114 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HMGN1P05114 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGN1P05114 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGN1P05114 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGN1P05114 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.52■□□□□ 0.07
HMGN1P05114 AC009336.1-201ENST00000608941 1553 ntBASIC15.52■□□□□ 0.07
HMGN1P05114 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
HMGN1P05114 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGN1P05114 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGN1P05114 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGN1P05114 AL353593.2-201ENST00000602529 1483 ntBASIC15.52■□□□□ 0.07
HMGN1P05114 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGN1P05114 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms