Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
HMGCRP04035 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCRP04035 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCRP04035 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HMGCRP04035 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HMGCRP04035 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGCRP04035 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGCRP04035 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 AL139327.4-201ENST00000612362 153 ntBASIC19.19■□□□□ 0.66
HMGCRP04035 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCRP04035 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
HMGCRP04035 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 KRT18P55-202ENST00000578578 1546 ntBASIC19.19■□□□□ 0.66
HMGCRP04035 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCRP04035 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCRP04035 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCRP04035 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGCRP04035 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMGCRP04035 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.18■□□□□ 0.66
HMGCRP04035 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMGCRP04035 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMGCRP04035 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HMGCRP04035 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.18■□□□□ 0.66
HMGCRP04035 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMGCRP04035 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGCRP04035 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCRP04035 MIR4453-201ENST00000584019 89 ntBASIC19.18■□□□□ 0.66
HMGCRP04035 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.18■□□□□ 0.66
HMGCRP04035 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCRP04035 AC073592.8-201ENST00000624126 511 ntBASIC19.18■□□□□ 0.66
HMGCRP04035 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HMGCRP04035 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMGCRP04035 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMGCRP04035 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCRP04035 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.17■□□□□ 0.66
HMGCRP04035 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCRP04035 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMGCRP04035 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMGCRP04035 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 MIR346-201ENST00000362234 95 ntBASIC19.17■□□□□ 0.66
HMGCRP04035 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMGCRP04035 AC027307.2-201ENST00000591252 911 ntBASIC19.17■□□□□ 0.66
HMGCRP04035 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.17■□□□□ 0.66
HMGCRP04035 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCRP04035 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGCRP04035 AC100757.3-201ENST00000622361 1406 ntBASIC19.17■□□□□ 0.66
HMGCRP04035 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCRP04035 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCRP04035 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCRP04035 NOC2LP1-202ENST00000452600 2235 ntBASIC19.16■□□□□ 0.66
HMGCRP04035 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCRP04035 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCRP04035 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.16■□□□□ 0.66
HMGCRP04035 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCRP04035 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HMGCRP04035 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms