Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GGPS1O95749 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GGPS1O95749 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
GGPS1O95749 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.14■□□□□ 0.65
GGPS1O95749 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.14■□□□□ 0.65
GGPS1O95749 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.14■□□□□ 0.65
GGPS1O95749 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GGPS1O95749 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.14■□□□□ 0.65
GGPS1O95749 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.14■□□□□ 0.65
GGPS1O95749 AL513210.1-201ENST00000629608 234 ntBASIC19.14■□□□□ 0.65
GGPS1O95749 AL645728.2-201ENST00000641974 660 ntBASIC19.14■□□□□ 0.65
GGPS1O95749 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.14■□□□□ 0.65
GGPS1O95749 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GGPS1O95749 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.14■□□□□ 0.65
GGPS1O95749 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.14■□□□□ 0.65
GGPS1O95749 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 HMGN1P19-201ENST00000436976 333 ntBASIC19.13■□□□□ 0.65
GGPS1O95749 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.13■□□□□ 0.65
GGPS1O95749 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.13■□□□□ 0.65
GGPS1O95749 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.13■□□□□ 0.65
GGPS1O95749 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
GGPS1O95749 EGFEM1P-202ENST00000431685 1563 ntBASIC19.13■□□□□ 0.65
GGPS1O95749 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
GGPS1O95749 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
GGPS1O95749 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.13■□□□□ 0.65
GGPS1O95749 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GGPS1O95749 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
GGPS1O95749 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.12■□□□□ 0.65
GGPS1O95749 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
GGPS1O95749 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 AC002056.1-201ENST00000395613 760 ntBASIC19.12■□□□□ 0.65
GGPS1O95749 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.12■□□□□ 0.65
GGPS1O95749 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.12■□□□□ 0.65
GGPS1O95749 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.12■□□□□ 0.65
GGPS1O95749 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.12■□□□□ 0.65
GGPS1O95749 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.12■□□□□ 0.65
GGPS1O95749 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GGPS1O95749 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.12■□□□□ 0.65
GGPS1O95749 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.12■□□□□ 0.65
GGPS1O95749 AC105339.1-204ENST00000636249 355 ntBASIC19.12■□□□□ 0.65
GGPS1O95749 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.12■□□□□ 0.65
GGPS1O95749 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GGPS1O95749 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GGPS1O95749 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
GGPS1O95749 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GGPS1O95749 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GGPS1O95749 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GGPS1O95749 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GGPS1O95749 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.11■□□□□ 0.65
GGPS1O95749 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms