Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS3O75489 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
NDUFS3O75489 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NDUFS3O75489 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NDUFS3O75489 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.08■□□□□ 0.32
NDUFS3O75489 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.08■□□□□ 0.32
NDUFS3O75489 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.08■□□□□ 0.32
NDUFS3O75489 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NDUFS3O75489 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.08■□□□□ 0.32
NDUFS3O75489 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.08■□□□□ 0.32
NDUFS3O75489 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.08■□□□□ 0.32
NDUFS3O75489 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.08■□□□□ 0.32
NDUFS3O75489 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NDUFS3O75489 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.08■□□□□ 0.32
NDUFS3O75489 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.08■□□□□ 0.32
NDUFS3O75489 AL355877.3-201ENST00000622820 899 ntBASIC17.08■□□□□ 0.32
NDUFS3O75489 AC012313.10-201ENST00000623509 926 ntBASIC17.08■□□□□ 0.32
NDUFS3O75489 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 NFIC-211ENST00000641145 8399 ntBASIC17.08■□□□□ 0.32
NDUFS3O75489 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 AC092068.3-201ENST00000587894 2016 ntBASIC17.08■□□□□ 0.32
NDUFS3O75489 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS3O75489 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS3O75489 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS3O75489 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
NDUFS3O75489 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NDUFS3O75489 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.07■□□□□ 0.32
NDUFS3O75489 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS3O75489 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.07■□□□□ 0.32
NDUFS3O75489 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS3O75489 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.07■□□□□ 0.32
NDUFS3O75489 REXO1L6P-202ENST00000619970 1078 ntBASIC17.07■□□□□ 0.32
NDUFS3O75489 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NDUFS3O75489 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS3O75489 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.07■□□□□ 0.32
NDUFS3O75489 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS3O75489 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS3O75489 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS3O75489 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 FRMD8P1-201ENST00000440433 1524 ntBASIC17.06■□□□□ 0.32
NDUFS3O75489 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 AC005915.1-201ENST00000624912 2018 ntBASIC17.06■□□□□ 0.32
NDUFS3O75489 NKILA-202ENST00000614771 2598 ntBASIC17.06■□□□□ 0.32
NDUFS3O75489 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.06■□□□□ 0.32
NDUFS3O75489 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NDUFS3O75489 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NDUFS3O75489 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.06■□□□□ 0.32
NDUFS3O75489 SCARNA2-201ENST00000458748 420 ntBASIC17.06■□□□□ 0.32
NDUFS3O75489 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.06■□□□□ 0.32
NDUFS3O75489 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.06■□□□□ 0.32
NDUFS3O75489 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.06■□□□□ 0.32
NDUFS3O75489 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NDUFS3O75489 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms