Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PFDN1O60925 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PFDN1O60925 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PFDN1O60925 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.28■□□□□ 0.04
PFDN1O60925 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PFDN1O60925 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PFDN1O60925 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PFDN1O60925 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.28■□□□□ 0.04
PFDN1O60925 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PFDN1O60925 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.27■□□□□ 0.04
PFDN1O60925 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PFDN1O60925 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
PFDN1O60925 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PFDN1O60925 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.27■□□□□ 0.04
PFDN1O60925 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.27■□□□□ 0.04
PFDN1O60925 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PFDN1O60925 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PFDN1O60925 MIR4767-201ENST00000582827 78 ntBASIC15.27■□□□□ 0.04
PFDN1O60925 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.27■□□□□ 0.03
PFDN1O60925 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PFDN1O60925 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 KRT8P32-201ENST00000512863 1461 ntBASIC15.27■□□□□ 0.03
PFDN1O60925 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PFDN1O60925 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 AC010491.1-201ENST00000563101 2797 ntBASIC15.26■□□□□ 0.03
PFDN1O60925 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.26■□□□□ 0.03
PFDN1O60925 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PFDN1O60925 AC009090.5-201ENST00000624886 2285 ntBASIC15.26■□□□□ 0.03
PFDN1O60925 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.26■□□□□ 0.03
PFDN1O60925 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.26■□□□□ 0.03
PFDN1O60925 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.26■□□□□ 0.03
PFDN1O60925 AC023632.3-201ENST00000521633 145 ntBASIC15.26■□□□□ 0.03
PFDN1O60925 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 LINC01451-201ENST00000623792 534 ntBASIC15.26■□□□□ 0.03
PFDN1O60925 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.26■□□□□ 0.03
PFDN1O60925 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms