Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CXCL13O43927 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.31■□□□□ 0.04
CXCL13O43927 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.31■□□□□ 0.04
CXCL13O43927 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.31■□□□□ 0.04
CXCL13O43927 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.31■□□□□ 0.04
CXCL13O43927 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.31■□□□□ 0.04
CXCL13O43927 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.31■□□□□ 0.04
CXCL13O43927 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCL13O43927 AL671883.3-201ENST00000603274 991 ntBASIC15.31■□□□□ 0.04
CXCL13O43927 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.31■□□□□ 0.04
CXCL13O43927 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCL13O43927 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.31■□□□□ 0.04
CXCL13O43927 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCL13O43927 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCL13O43927 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCL13O43927 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CXCL13O43927 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCL13O43927 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCL13O43927 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CXCL13O43927 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CXCL13O43927 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.31■□□□□ 0.04
CXCL13O43927 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
CXCL13O43927 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CXCL13O43927 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.3■□□□□ 0.04
CXCL13O43927 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 PRSS29P-201ENST00000440800 595 ntBASIC15.3■□□□□ 0.04
CXCL13O43927 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.3■□□□□ 0.04
CXCL13O43927 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCL13O43927 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.3■□□□□ 0.04
CXCL13O43927 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.3■□□□□ 0.04
CXCL13O43927 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.3■□□□□ 0.04
CXCL13O43927 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCL13O43927 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.3■□□□□ 0.04
CXCL13O43927 AC064836.3-201ENST00000607928 673 ntBASIC15.3■□□□□ 0.04
CXCL13O43927 LINC02012-201ENST00000608206 1725 ntBASIC15.3■□□□□ 0.04
CXCL13O43927 AC010654.1-201ENST00000615722 808 ntBASIC15.3■□□□□ 0.04
CXCL13O43927 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCL13O43927 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CXCL13O43927 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.3■□□□□ 0.04
CXCL13O43927 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 AL645608.8-201ENST00000606034 2086 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCL13O43927 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.29■□□□□ 0.04
CXCL13O43927 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CXCL13O43927 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CXCL13O43927 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.29■□□□□ 0.04
CXCL13O43927 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 AL591424.1-201ENST00000442569 1213 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 KRT18P3-201ENST00000451602 1288 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 SLC25A6P2-201ENST00000497974 877 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.29■□□□□ 0.04
CXCL13O43927 OR7E47P-204ENST00000575924 449 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.29■□□□□ 0.04
CXCL13O43927 FAM197Y3-203ENST00000618346 717 ntBASIC15.29■□□□□ 0.04
CXCL13O43927 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.29■□□□□ 0.04
CXCL13O43927 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CXCL13O43927 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CXCL13O43927 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CXCL13O43927 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms