Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
KDELR3O43731 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
KDELR3O43731 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDELR3O43731 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.31■□□□□ 0.36
KDELR3O43731 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
KDELR3O43731 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
KDELR3O43731 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.3■□□□□ 0.36
KDELR3O43731 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
KDELR3O43731 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 TUBB8P12-201ENST00000308911 1335 ntBASIC17.3■□□□□ 0.36
KDELR3O43731 TUBB7P-202ENST00000428444 1305 ntBASIC17.3■□□□□ 0.36
KDELR3O43731 TUBB8P7-204ENST00000567960 1332 ntBASIC17.3■□□□□ 0.36
KDELR3O43731 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 RHOQP3-201ENST00000437982 621 ntBASIC17.3■□□□□ 0.36
KDELR3O43731 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 ACTL9-202ENST00000612068 1252 ntBASIC17.3■□□□□ 0.36
KDELR3O43731 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.3■□□□□ 0.36
KDELR3O43731 AC010507.1-201ENST00000633895 436 ntBASIC17.3■□□□□ 0.36
KDELR3O43731 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
KDELR3O43731 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.3■□□□□ 0.36
KDELR3O43731 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KDELR3O43731 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KDELR3O43731 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDELR3O43731 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.29■□□□□ 0.36
KDELR3O43731 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.29■□□□□ 0.36
KDELR3O43731 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.29■□□□□ 0.36
KDELR3O43731 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.29■□□□□ 0.36
KDELR3O43731 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.29■□□□□ 0.36
KDELR3O43731 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
KDELR3O43731 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
KDELR3O43731 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
KDELR3O43731 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.29■□□□□ 0.36
KDELR3O43731 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDELR3O43731 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
KDELR3O43731 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
KDELR3O43731 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
KDELR3O43731 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.28■□□□□ 0.36
KDELR3O43731 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 PMS2P7-201ENST00000506558 1336 ntBASIC17.28■□□□□ 0.36
KDELR3O43731 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.28■□□□□ 0.36
KDELR3O43731 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.28■□□□□ 0.36
KDELR3O43731 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.28■□□□□ 0.36
KDELR3O43731 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KDELR3O43731 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.28■□□□□ 0.36
KDELR3O43731 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.28■□□□□ 0.36
KDELR3O43731 PGAM5P1-201ENST00000518923 814 ntBASIC17.28■□□□□ 0.36
KDELR3O43731 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.28■□□□□ 0.36
KDELR3O43731 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KDELR3O43731 AC018845.2-201ENST00000568326 409 ntBASIC17.28■□□□□ 0.36
KDELR3O43731 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.28■□□□□ 0.36
KDELR3O43731 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.28■□□□□ 0.36
KDELR3O43731 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.28■□□□□ 0.36
KDELR3O43731 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.28■□□□□ 0.36
KDELR3O43731 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KDELR3O43731 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDELR3O43731 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KDELR3O43731 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms