Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
UPK1AO00322 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
UPK1AO00322 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 OR6D1P-202ENST00000641007 5290 ntBASIC16.24■□□□□ 0.19
UPK1AO00322 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
UPK1AO00322 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
UPK1AO00322 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.24■□□□□ 0.19
UPK1AO00322 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.24■□□□□ 0.19
UPK1AO00322 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.24■□□□□ 0.19
UPK1AO00322 NUS1P1-201ENST00000446295 882 ntBASIC16.24■□□□□ 0.19
UPK1AO00322 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.24■□□□□ 0.19
UPK1AO00322 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.24■□□□□ 0.19
UPK1AO00322 MIR3652-201ENST00000579335 131 ntBASIC16.24■□□□□ 0.19
UPK1AO00322 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.24■□□□□ 0.19
UPK1AO00322 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.24■□□□□ 0.19
UPK1AO00322 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.24■□□□□ 0.19
UPK1AO00322 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
UPK1AO00322 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UPK1AO00322 AL135999.2-201ENST00000622438 1686 ntBASIC16.24■□□□□ 0.19
UPK1AO00322 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.24■□□□□ 0.19
UPK1AO00322 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UPK1AO00322 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 AL596257.1-201ENST00000641463 2694 ntBASIC16.23■□□□□ 0.19
UPK1AO00322 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
UPK1AO00322 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 ABCD1P5-201ENST00000445663 754 ntBASIC16.23■□□□□ 0.19
UPK1AO00322 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
UPK1AO00322 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UPK1AO00322 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UPK1AO00322 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UPK1AO00322 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UPK1AO00322 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.22■□□□□ 0.19
UPK1AO00322 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UPK1AO00322 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.22■□□□□ 0.19
UPK1AO00322 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1AO00322 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 AL662844.4-201ENST00000606367 2838 ntBASIC16.22■□□□□ 0.19
UPK1AO00322 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1AO00322 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms