Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CHKB-CPT1BH3BT56 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 AL096828.2-201ENST00000567259 1965 ntBASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 NAA20-201ENST00000310450 920 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 TSPY13P-201ENST00000338964 914 ntBASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 AICDA-202ENST00000537228 667 ntTSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 MIR4449-201ENST00000578365 66 ntBASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 AL499627.1-201ENST00000569373 2188 ntBASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 AL391807.1-203ENST00000604392 2365 ntBASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CHKB-CPT1BH3BT56 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AL138688.1-201ENST00000624851 1594 ntBASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms