Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC023274.1-201ENST00000418278 595 ntBASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 PRSS29P-201ENST00000440800 595 ntBASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC005829.1-201ENST00000570002 483 ntBASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 REXO1L9P-201ENST00000604264 2108 ntBASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMX2-CTNND1H3BSU7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.83■□□□□ 0.29
TMX2-CTNND1H3BSU7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMX2-CTNND1H3BSU7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMX2-CTNND1H3BSU7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
TMX2-CTNND1H3BSU7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMX2-CTNND1H3BSU7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TMX2-CTNND1H3BSU7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 KLF4P1-201ENST00000412782 1185 ntBASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 AP006288.1-201ENST00000446065 395 ntBASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms