Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 AL139288.1-201ENST00000623748 933 ntBASIC12.85□□□□□ -0.35
KNCNA6PVL3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KNCNA6PVL3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
KNCNA6PVL3 AC080080.1-201ENST00000625121 2420 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 AC116353.5-201ENST00000638148 1699 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 AC004870.1-201ENST00000315132 882 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 SCARNA2-201ENST00000458748 420 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 RN7SL510P-201ENST00000581311 263 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 AL691432.3-201ENST00000621860 400 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 AC073592.4-201ENST00000623827 446 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 AL022326.1-202ENST00000641533 845 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 SIGLEC16-201ENST00000599858 1437 ntBASIC12.84□□□□□ -0.35
KNCNA6PVL3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.84□□□□□ -0.35
KNCNA6PVL3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KNCNA6PVL3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
KNCNA6PVL3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.83□□□□□ -0.35
KNCNA6PVL3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KNCNA6PVL3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 AP001094.4-201ENST00000579008 2176 ntBASIC12.83□□□□□ -0.36
KNCNA6PVL3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 LINC00982-205ENST00000420957 435 ntBASIC12.83□□□□□ -0.36
KNCNA6PVL3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 MTDHP4-201ENST00000600287 670 ntBASIC12.83□□□□□ -0.36
KNCNA6PVL3 AC064862.7-201ENST00000604520 867 ntBASIC12.83□□□□□ -0.36
KNCNA6PVL3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
KNCNA6PVL3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KNCNA6PVL3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms