Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 AC091167.2-201ENST00000579581 588 ntBASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 MIR4492-201ENST00000581627 80 ntBASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 AC009053.2-201ENST00000563701 2365 ntBASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV5-4A0A0C4DH59 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 AGGF1P2-201ENST00000426656 2106 ntBASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 IL9RP2-201ENST00000423948 1312 ntBASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 RNF216P1-203ENST00000404404 2427 ntBASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-4A0A0C4DH59 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 AC079776.4-201ENST00000511039 504 ntBASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 MPDU1-223ENST00000582151 728 ntBASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 Z83851.2-201ENST00000609564 659 ntBASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 BX640515.1-201ENST00000617215 977 ntBASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-4A0A0C4DH59 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC006277.1-201ENST00000624348 1610 ntBASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 NKILA-202ENST00000614771 2598 ntBASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-4A0A0C4DH59 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms