Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 AP3S2-216ENST00000617003 1561 ntBASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PTCH2Q9Y6C5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTCH2Q9Y6C5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTCH2Q9Y6C5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
PTCH2Q9Y6C5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 RNU1-129P-201ENST00000384064 167 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 AC142381.1-201ENST00000426099 345 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 GNAQP1-201ENST00000444815 1067 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 U1.21-201ENST00000580816 167 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 AL844908.2-201ENST00000609461 460 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 AC004840.1-201ENST00000636359 365 ntBASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.14■□□□□ 0.65
PTCH2Q9Y6C5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 AC022210.1-201ENST00000449856 793 ntBASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.13■□□□□ 0.65
PTCH2Q9Y6C5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 AC087499.5-201ENST00000452760 1342 ntBASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 WASH4P-201ENST00000564273 1246 ntBASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 AC106886.1-201ENST00000568660 600 ntBASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 TEX28P1-201ENST00000613479 1221 ntBASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 TEX28P2-201ENST00000617764 1221 ntBASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCH2Q9Y6C5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCH2Q9Y6C5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms