Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 HCG4P8-203ENST00000443049 980 ntBASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 PRYP5-201ENST00000451909 266 ntBASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 AL732292.2-201ENST00000609649 430 ntBASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CYP46A1Q9Y6A2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 BX005266.1-201ENST00000473402 457 ntBASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 PCDHB17P-201ENST00000539533 2393 ntBASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.31■□□□□ 0.84
CYP46A1Q9Y6A2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYP46A1Q9Y6A2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 RBM17P3-201ENST00000417687 1192 ntBASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms