Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 EGFEM1P-202ENST00000431685 1563 ntBASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA11Q9Y5H2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGA11Q9Y5H2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 SPDYE21P-201ENST00000413323 827 ntBASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 NUS1P1-201ENST00000446295 882 ntBASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 AC124947.2-201ENST00000547118 1133 ntBASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 AC138894.3-201ENST00000603787 634 ntBASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA11Q9Y5H2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 AC060834.1-201ENST00000443027 2032 ntBASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms