Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 AL354751.1-201ENST00000412768 1863 ntBASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 TUBB3P1-201ENST00000405796 1332 ntBASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB7Q9Y5E2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 MIR4745-201ENST00000577608 62 ntBASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PCDHB7Q9Y5E2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 HCG4-201ENST00000418983 998 ntBASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 AC109635.5-201ENST00000533593 962 ntBASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 KRT8P23-201ENST00000560090 1207 ntBASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 AL390955.2-201ENST00000603032 514 ntBASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB7Q9Y5E2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB7Q9Y5E2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms