Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 MIR662-201ENST00000384847 95 ntBASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 AC005332.1-201ENST00000577698 1310 ntBASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 AL358472.4-201ENST00000633140 710 ntBASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
R3HCC1Q9Y3T6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 KRT89P-201ENST00000620027 1478 ntBASIC19.67■□□□□ 0.74
R3HCC1Q9Y3T6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 AC022188.1-201ENST00000620960 1664 ntBASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms