Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 LINC00895-201ENST00000629028 1637 ntBASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPO2Q9UMS6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 SPCS2P4-201ENST00000436160 681 ntBASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 AL592309.1-201ENST00000443127 649 ntBASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 CYMP-203ENST00000474680 1263 ntBASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 AL512356.2-201ENST00000546955 174 ntBASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPO2Q9UMS6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 AC069335.1-201ENST00000489972 472 ntBASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 AC025678.2-201ENST00000562061 970 ntBASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 AL355385.1-201ENST00000606123 409 ntBASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPO2Q9UMS6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms