Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 AC073621.1-201ENST00000392730 636 ntBASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CNOT6Q9ULM6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 AP002414.3-201ENST00000589352 1468 ntBASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 AC018695.7-201ENST00000624587 2492 ntBASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 LINC00982-205ENST00000420957 435 ntBASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 AC105339.3-201ENST00000560043 636 ntBASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 BX640515.1-201ENST00000617215 977 ntBASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 NCF1C-201ENST00000438382 1427 ntBASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 IL9RP2-201ENST00000423948 1312 ntBASIC17.19■□□□□ 0.34
CNOT6Q9ULM6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 AL590627.1-203ENST00000421194 1026 ntBASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 AP000347.1-202ENST00000435868 847 ntBASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 AC093909.1-201ENST00000504731 1122 ntBASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 AL353135.1-201ENST00000606729 504 ntBASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 AC006504.4-201ENST00000592118 1568 ntBASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT6Q9ULM6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT6Q9ULM6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT6Q9ULM6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CNOT6Q9ULM6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CNOT6Q9ULM6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CNOT6Q9ULM6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms